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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935775.1_cds_XP_016481518.1_72838
CDS Infomation

[gene=LOC107802514] [db_xref=GeneID:107802514] [protein=DEAD-box ATP-dependent RNA helicase 18-like] [protein_id=XP_016481518.1] [location=complement(join(59205..59490,59683..59826,59902..60008,60632..60721,60839..60937,61731..61844,61937..62042,62147..62226,62327..62581,63279..63515,64599..64859))] [gbkey=CDS]
Sequence

ATGGCGTCGAATCCGAACAACGCCTTAACGAATACGCGTTTCTCCGACCTCGAACCACGC
CTCTCGGAGCCAGTTTTGGAAGCCTTAACCAATTCAGGCTTCGAGTTTTGTACTCCTGTT
CAGGCCGCCACCATACCCTTACTCTGCAACTACAAGGATGTCACCGTCGACGCCGCCACT
GGCTCTGGTAAAACCCTAGCCTTCGTCGTTCCTCTCGTTGAGATCCTCCGTCGCTCCTCC
TCTAACCCCAAACCTCACCAGGTAATGGGTATAATTATATCACCTGCCAGGGAGTTGTCG
TCACAAATATTTCACGTTGCTCAACCGTTCATTTCCACATTAGCAAATGTTAGGCCTATG
CTCCTCGTTGGAGGACAAGATGTAAATGCAGATCTCAGGAAGATAGAGGAAGAAGGAGCA
AATTTGTTGATCGGGACACCTGGGAGGCTATATGACATAATGGAGCGCATGGATATACTG
GACTTACGGGATTTTGAGATTCTGATATTAGATGAGGCTGATAGGCTATTAGAGATGGGA
TTTGAAAAACAGATAAATTCAATTATTTCTCGATTACCTAAACTTCGAAGAACGGGTCTC
TTCTCTGCTACACAAACTGAGGCAGTTGAAGAACTATCAAAGGCAGGATTAAGAAATCCT
GTCAGGGTTGAAGTTCGGGCAGAAGCAAAACAGTTGAATGGTTCTGCATCATCTGGGAAT
TCGTCAAAAACACCTTCCGGCCTTCATATTGAGTATCTTGAATGCGAAGCGGACAAGAAA
TCTTCGCAGCTTGTACACCTCCTAACGAAGAACAAGTCAAAAAAAATTATGATCTATTTC
ATGACTTGTGCTTGTGTTGATTACTGGGGAACTGTTCTTCCGCGTCTCTTTTGTCTGAAA
AGTTTTTCATTAATATCTCTTCATGGAAAGATGAAGCAGAGTGCAAGGGAGAAAGCAATA
GCATCATTTACATCTATTTCTAGCGGCATTCTTTTATGCACAGATGTAGCAGCACGTGGA
CTTGATATACCAGGTGTTGATTATATAATACAGTACGACCCTCCTCAGGATCATAAAATG
TTTATACATAGAGTAGGCCGAACAGCAAGGCTGGGCCGACAAGGAAGTGCTGTTGTTTTT
CTATTACCAAAGGAGGAAGCATATGTGGAATTCTTGCGTCTACAAGGCGTTTTCTTAGAA
GAGGGGGAATGTGCCTCTGAGGCTCCCGATATTATCGATGAAATACGGTCAGCAGCAAAG
AAAGATCGTGATGTAATGGAGAAAGGACTTAGGGCCTTTGTGTCATACATCCGTGCGTAT
AAAGAGCATCACTGCTCTTACATTTTGAGGTGGAAGGAGCTTGAGATTGGGAAGCTGGGC
ACAGGATATGGTCTTTTGCAGCTTCCTTCTGTGCCTGAGGTGAAGCATCATTCTCTTTCT
ACGAAGGGATTTACCACAGTTGAAGATATCAACCTGGAGGAAATCAAGTTTAAGGACAAG
TCCCGGGAGAAGCAAAGAAAGAAGAATTTGCAAGCGAGAAAAGCTGCAAGGGCACAACAA
GAAGAACAGAAGACACAGAGACTTAAAAAAGAGGCAAATTCTACAGTAACTGCCATGAGA
AAGAAAACTGCCAAACAGAGACGTGCTACGCAGTTAGTTGAAGATGATGATGAGATTACA
AGGGAGTACCGCTTAATGAAAAAGCTGAAAAAGGGAGCGATCAATGAGAATGAGTTTGCA
AAATTGACTGGGACTGAGGACTTGCTTTCTGACATATGA

Peptide Sequence

PEP ID

XP_016481518.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Nicotiana tabacum]
Sequence

MASNPNNALTNTRFSDLEPRLSEPVLEALTNSGFEFCTPVQAATIPLLCNYKDVTVDAAT
GSGKTLAFVVPLVEILRRSSSNPKPHQVMGIIISPARELSSQIFHVAQPFISTLANVRPM
LLVGGQDVNADLRKIEEEGANLLIGTPGRLYDIMERMDILDLRDFEILILDEADRLLEMG
FEKQINSIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEAKQLNGSASSGN
SSKTPSGLHIEYLECEADKKSSQLVHLLTKNKSKKIMIYFMTCACVDYWGTVLPRLFCLK
SFSLISLHGKMKQSAREKAIASFTSISSGILLCTDVAARGLDIPGVDYIIQYDPPQDHKM
FIHRVGRTARLGRQGSAVVFLLPKEEAYVEFLRLQGVFLEEGECASEAPDIIDEIRSAAK
KDRDVMEKGLRAFVSYIRAYKEHHCSYILRWKELEIGKLGTGYGLLQLPSVPEVKHHSLS
TKGFTTVEDINLEEIKFKDKSREKQRKKNLQARKAARAQQEEQKTQRLKKEANSTVTAMR
KKTAKQRRATQLVEDDDEITREYRLMKKLKKGAINENEFAKLTGTEDLLSDI

Transcript Sequence

Gene sequence data has not been registered.